Methanotrophs (sometimes called methanophiles) are bacteria that are able to metabolize methane as their only source of carbon and energy. They can grow aerobically or anaerobically and require single-carbon compounds to survive. Under aerobic conditions, they combine oxygen and methane to form formaldehyde, which is then incorporated into organic compounds via the serine pathway or the RuMP pathway. Type I methanotrophs are part of the Gammaproteobacteria and they use the ribulose monophosphate (RuMP) pathway to assimilate carbon. On the other hand, type II methanotrophs are part of the Alphaproteobacteria and utilize the Serine pathway of carbon assimilation. They also characteristically have a system of internal membranes within which methane oxidation occurs. Methanotrophs occur mostly in soils, and are especially common near environments where methane is produced. Their habitats include oceans, mud, marshes, underground environments, soils, rice paddies and landfills. They are of special interest to researchers studying global warming, as they are significant in the global methane budget.[1][2]

Gratuitous detoxification of some environmental contaminants such as chlorinated hydrocarbons by methanotrophs have made them attractive models for such bioremediation processes. Equally methane is a potential greenhouse gas far more potent that carbon dioxide. Therefore methanotrophs play a major role in the reduction of the release of methane into the atmosphere from environments such as rice paddies, landfills, bogs and swamps where methane production is relatively high.

Differences in the method of formaldehyde fixation and membrane structure divide the methanotrophs into several groups. These include the Methylococcaceae and Methylocystaceae. Although both are included among the Proteobacteria, they are members of different subclasses. Other methanotroph species are found in the Verrucomicrobiae.

Methanotrophy is a special case of methylotrophy, using single-carbon compounds that are more reduced than carbon dioxide. Some methylotrophs, however, can also make use of multi-carbon compounds which differentiates them from methanotrophs that are usually fastidious methane and methanol oxidizers. The only facultative methanotroph isolated to date are members of the genus Methylocella.

Investigations in marine environments revealed that methane can be oxidized anaerobically by consortia of methane oxidizing archaea and sulfate-reducing bacteria. Anaerobic oxidation of methane (AOM) mainly occurs in anoxic marine sediments. The exact mechanism of methane oxidation under anaerobic conditions is still a topic of debate but the most widely accepted theory is that the archaea use the reversed methanogenesis pathway to produce carbon dioxide and another, unknown substance. This unknown intermediate is then used by the sulfate-reducing bacteria to be able to gain energy from the reduction of sulfate to hydrogen sulfide. The anaerobic methanothrophs are not related to the known aerobic methanotrophs; the closest cultured relative to the anaerobic methanotrophs are the methanogens in the order of Methanosarcinales.

Recently, a new bacterium Candidatus Methylomirabilis oxifera was identified that can couple the anaerobic oxidation of methane to nitrite reduction without the need for a syntrophic partner. Based on the studies of Ettwig et al., it is believed that M. oxyfera oxidizes methane anaerobically by utilizing the oxygen produced internally from the dismutation of nitric oxide into nitrogen and oxygen gas.


  1. ^ Oremland, R. S.; Culbertson, C. W. (1992). "Importance of methane-oxidizing bacteria in the methane budget as revealed by the use of a specific inhibitor". Nature 356 (6368): 421. Bibcode 1992Natur.356..421O. doi:10.1038/356421a0.  edit
  2. ^ Holmes, AJ; Roslev, P; McDonald, IR; Iversen, N; Henriksen, K; Murrell, JC (1999). "Characterization of methanotrophic bacterial populations in soils showing atmospheric methane uptake". Applied and environmental microbiology 65 (8): 3312–8. PMC 91497. PMID 10427012.  edit

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